ME Boroujeni's repositories
asbmb
asbmb Teaching science with big data presentation 2021
basic-git-practice
Basic git course - Practice repository
cloudbiolinux
CloudBioLinux: configure virtual (or real) machines with tools for biological analyses
Integrative_Analysis
Codes for running integrative analysis of multi-omics data
MQ_Datasets
Meta Analysis of Macrophage Datasets
my_website
This is a personal website
networks_motifs
Networks for IFa and IFg project
conda
Specifying a conda environment with `environment.yml`
conos
R package for the joint analysis of multiple single-cell RNA-seq datasets
cs-video-courses
List of Computer Science courses with video lectures.
evolution
This repository contains the code for our manuscript - 'The evolution, evolvability, and engineering gene regulatory DNA'
Genetics_Project_Collaborative
Studying the Genetic Basis of Disease Using Bioinformatics Tools within the Google Colab Environment
intro_python
Lecture Notes and Slides for UCSC CSE20, formatted as Jupyter Notebooks.
Machine-Learning-Books-With-Python
Chapter by Chapter notes, exercises and code for a variety of machine learning books using Python
MEBlog
The blog template
my-first-binder
my first binder
NGS-variants-training
GitHub for the SIB courses NGS - Genome variant analysis
pom
:alarm_clock: Pomodoro timer built with ReactJS.
rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
SciCompforChemists
Scientific Computing for Chemists text for teaching basic computing skills to chemistry students using Python, Jupyter notebooks, and the SciPy stack. This text makes use of a variety of packages including NumPy, SciPy, matplotlib, pandas, seaborn, NMRglue, SymPy, scikit-image, and scikit-learn.
statements
Successful Job Applications and Grants
training-collection
Collection of bioinformatics training materials