pcarion / 23andme

Parser for 23 and me export file

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23andme

Parser for 23 and me export file

This program only parses the file and makes available the SNPs in a data structure, as an array of

type Snip struct {
	rsid       string
	chromosome string
	position   int64
	genotype   string
}

This could be the starting point to further process those data.

A starting point could be to look at the projects listed there:

https://github.com/plashchynski/awesome-genetics

How to use

  • download your raw data from 23andme and store the file in the data directory.

  • This file can either be a acompressed file (.zip extension) or a text file.

  • then run:

go run cmd/23andme/main.go --data <path to your data file>

About

Parser for 23 and me export file

License:BSD 3-Clause "New" or "Revised" License


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Language:Go 100.0%