Patrick Allen Fletcher's repositories

scToolbox

A collection of tools for analysis and plotting of single-cell RNA sequencing data

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bhtsne

Barnes-Hut t-SNE

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CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

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clODE

clODE is an OpenCL based tool for solving ordinary differential equations (ODEs)

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EgreTT

a merezoite Egress Tracking Tool for light microscopy studies

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frame-interpolation-pytorch

PyTorch implementation of FILM: Frame Interpolation for Large Motion, In ECCV 2022.

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gramm

Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.

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Learning-Processing

The project files of the exercises that I'm doing while learning Processing.

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OscAr

Oscillation Analyzer for biological timeseries data

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Models

A place to collect codes for various mathematical models I have worked on

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opioid-codeathon

Source code for 2017 HHS Opioid Code-a-thon

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ready

A cross-platform implementation of various reaction-diffusion systems.

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SARndbox

Augmented reality application scanning a sand surface using a Kinect 3D camera, and projecting a real- time updated topography map with topographic contour lines, hillshading, and an optional real-time water flow simulation back onto the sand surface using a calibrated projector

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tinyatlas

A tiny cell atlas for commonly sequenced organisms.

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upscalers

AI upscaling of images

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Violinplot-Matlab

Violin Plots for Matlab

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