pati-ni's repositories
dvorak-qwerty
Linux configuration files for Dvorak Keyboard Layouts with Qwerty layout modifier keys
bandcamp-downloader
Downloads tracklist from bandcamp site and assigns metadata to the tracks
coop
Fast covariance, correlation, and cosine similarity.
CRISPR-timeseq
Drop out screen analysis of time sequence data
emacs-config
GNU Emacs configuration files
geospatial-data
This is a repository that utilizes the C++ STL to build efficient algoritmhs that handle geospatial data
harmony
Fast, sensitive and accurate integration of single-cell data with Harmony
openreplica-stress
Stress framework for Openreplica
pati-ni.github.io
GSoC '17 blog
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
scRNA-seq_silk_organoids
This repo holds the code for the paper "Single cell transcriptomics captures features of developing and mature DA neurons in human brain organoids and reveals more precise and reproducible patterning in silk-bioengineered culture"
scRNA.seq.datasets
Collection of public scRNA-Seq datasets used by our group
statannot
add statistical annotations (pvalue significance) on an existing boxplot generated by seaborn boxplot
zookeeper-benchmark
Our benchmarking tool for ZooKeeper
zookeeper-stress
Testing framework for stressing Apache zookeeper write performance