Mirth-Snippets

This repository contains various code snippets and utilities for working with Mirth Connect, AWS, databases, JWT, and other integration-related tasks.

Repository Structure

The repository is organized by different use cases. Below is a summary of the main scripts and documentation included in this repository.

Mirth Connect Related Scripts

AWS_getSecret.js: Retrieves secrets from AWS Secrets Manager for use within Mirth Connect.
ActiveMQ_JMS_Listener.js: Script to listen for messages on ActiveMQ using JMS.
ActiveMQ_JMS_Sender.js: Script to send messages to ActiveMQ using JMS.
MirthSSH_4.5.md: Documentation on using SSH with Mirth Connect.
HL7 add FHIR.xml: Example of adding FHIR to an HL7 message.
mirth_and_MSSQL_withTLS.md: Guide for connecting Mirth Connect to MSSQL with TLS.
mirth_backup.md: Mirth backup strategy and instructions.
mirth_bash_backup.sh: A bash script for automating Mirth backups.

Database and Data Processing Utilities

DBCP2.js: Database connection pooling using DBCP2.
DBReadertoCSV.js: Converts database reader output to CSV format.
ResultSetUtil.js: Utility functions to manipulate ResultSet data.
executeSharedDBStatement.js: Executes shared database statements across multiple sources.

JWT (JSON Web Tokens)

JWTviaJS.js: Generates JWT tokens using JavaScript. VERY SLOW
JWTviaJose4jlib.js: Generates JWT tokens using the Jose4j Java library.
epicJWTforBackend_uses_jsrassign.js: Generates JWT for backend systems using jsrassign.
epicJWTusingNimbusJava.js: Generates JWT using the Nimbus Java JWT library. I USE THIS ONE
nimbus-jose-jwt.jar: JAR file for Nimbus Jose JWT library. NEEDED FOR epicJWTusingNimbusJava

File Manipulation Utilities

PDFtoTIFF.js: Converts PDF files to TIFF format.
combineBase64PDFs.js: Combines multiple Base64-encoded PDFs into one file.
create_dir.js: Creates directories dynamically within scripts.
create_zip_with_wildcards.js: Zips files based on wildcard patterns.
movefile.js: Moves files between directories.

SFTP and SSH Utilities

sftp_get_to_attachment_newJsch.js: Retrieves files via SFTP using the JSch library.
sftpviaSSHJ.js: Handles SFTP transfers using the SSHJ library.
loginMirthConnectAPI.js: Automates login to the Mirth Connect API using SSH.

Miscellaneous Utilities

bluebutton_simple_api.js: Example of a simple Blue Button API.
createDebugMap.js: Creates a debug map for tracking processing information.
createListofAttachments.js: Generates a list of attachments from a source.
dynamic_source_file_reader_name.js: Dynamically sets source file names during processing.
groupAndSum.js: Groups and sums data based on specified criteria.
replaceNullsWithEmptyStrings.js: Replaces null values with empty strings in data structures.
router.routeMessage.js
select_named_headers_from_sourceMap.js: Selects named headers from a source map.
sum_and_group_v2.js: Advanced grouping and summing of data.

Documentation and SQL Queries

HAPI_FHIR_example.md: Documentation on integrating HAPI FHIR with Mirth Connect.
message_response_time.sql: SQL query to analyze message response times.
mssql_jdbc_connect_strings.txt: MSSQL JDBC connection strings.

License

This project is licensed under the MIT License - see the LICENSE file for details.

Contributions

Feel free to submit issues or pull requests if you have improvements or find bugs in the scripts.

pacmano1 / Mirth-Snippets