This repository contains code for reproducing the figures and results in the preprint Meichen Fang, Gennady Gorin, Lior Pachter (2024).
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RADOM/
: a python package that implement the fittingmodels/
:two_species_ss.py
:two_species_ss_tau.py
:one_species.py
:
inference.py
: Define the Trajectory class
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simulations/
: notebooks for simulations. -
notebooks/
: notebooks to perform all analyses on real datasets.forebrain.ipynb
:erythroid.ipynb
:rpe1.ipynb
:PBMC.ipynb
:Neuron.ipynb
: