pBFSLab / DeepPrep

DeepPrep: An accelerated, scalable, and robust pipeline for neuroimaging preprocessing empowered by deep learning

https://deepprep.readthedocs.io

pBFSLab/DeepPrep Issues

Bids-validator/cli not found
Updated 16 days ago
Run DeepPrep offline
Closed 2 months ago
CIFIT output
Updated 2 months ago
Manual editing of brain masks
Closed 3 months ago4
Functional outputs (brain mask and T1w)
Updated 4 months ago3
Fails while running `bold_wf:bold_get_bold_file_in_bids` and `anat_wf:anat_get_t1w_file_in_bids`
Closed 4 months ago13
crushed during 'anat_wf:anat_create_summary'
Closed 5 months ago2
Process `anat_wf:anat_sphere` terminated for an unknown reason -- Likely it has been terminated by the external system
Closed 5 months ago2
Feature Request: Allow None as a Valid Option for --bold_surface_spaces and --bold_volume_space
Closed 6 months ago1
Question about the confounds `confounds_series.txt` file
Closed 6 months ago1
One frame of bold data deleted from projecting from t1w space to MNI
Closed 6 months ago4
Support set multiple task-labels with --bold_task_type
Closed 6 months ago4
The usage of xfm files
Closed 6 months ago3
Wrong participant with bold_only flag
Closed 7 months ago3
Skullstripping failure for 7T MP2RAGE anat
Closed 7 months ago1
Questions about output
Closed 7 months ago1
I'm very interested to try this. Have you considered..
Updated 7 months ago6