orbitz / paramugsy

ParaMugsy, a parallelized, distributed, multiple whole genome aligner based on Mugsy

Notes:

Because I am using ocaml's standard integer type, for larges sequences this will only work on 64-bit machines

The stitching algorithm

ParaMugsy, a parallelized, distributed, multiple whole genome aligner based on Mugsy

Language:OCaml 64.1%Language:C++ 32.8%Language:Perl 1.5%Language:Shell 1.5%