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bdz

Zarr-based format for storing quantitative biological dynamics data

Language:Jupyter NotebookApache-2.06 7 1

4D-cell-nuclear-tracking

4D cell nuclear tracking and cell dynamics analysis - a training course

Language:MATLABGPL-3.04 40

omero-web

Dockerfile to build a ready-to-use OMERO.server in auto-login mode

Language:Shell2 50

OpenSSBD

OpenSSBD Database Engine - for storing and retrieving quantitative data of biological dynamics

Language:PythonNOASSERTION2 40

BD5_samples

Sample codes for BD5 file format

Language:Jupyter NotebookGPL-3.01 10

BDML-BD5

an open format for representing quantitative biological dynamics data

Language:Jupyter Notebook1 50

bd5lint

This repository contains the source codes for bd5lint, a tool that analyzes BD5 file format and flag syntactic errors and suspicious constructs.

Language:PythonGPL-3.0040

bdml2bd5-docker

Language:DockerfileGPL-3.0050

EXCEL2CSV

Language:Jupyter Notebook020

hikarijuku

Tutorial for Hikarijuku

Language:Jupyter NotebookGPL-3.0040

MATLAB_SSBDapi

Language:MATLABGPL-3.0040

Py_SSBDapi

Python API to access SSBD

Language:Jupyter Notebook050

ssbd-metadata

SSBD metadata

000

SSBD-OMERO_api

Python example codes to access SSBD-OMERO API

Language:Jupyter Notebook040

BDML2BD5

BDML2BD5 is a converter from BDML file to BD5 file

Language:C++GPL-3.0040

CombineSearch-OMERO

Searching across different OMERO servers

Language:Jupyter NotebookGPL-3.0040

Java_SSBDapi

Java package to access SSBD REST API

Language:Java040

python-bdml

Python codes for BDML/BD5

Language:PythonGPL-3.0040

QTBD5Viewer

A visualizer for BD5-format files

Language:C++GPL-3.0030