OpenProphetDB's repositories
biomedgps-data
Biomedical knowledge graph & graph neural network models for drug repurposing.
prophet-studio
A labeling tool for building your own domain knowledgebase from biomedical publications. Let us read the papers routinely and build our own domain knowledgebase together.
biomedical-knowledgebases
A collection of biomedical knowledgebases, ontologies, and datasets.
biominer-components
UI Components for BioMiner
ontology-matcher
It's a simple ontology matcher for building a set of cleaned ontologies. [For BioMedGPS project]
dgl-ke
High performance, easy-to-use, and scalable package for learning large-scale knowledge graph embeddings.
knowledge-graph-editor
This extension is designed for synchronizing findings/knowledges into a biomedgps instance. The findings/knowledges are annotated from literature and other sources using Label Studio.
prophetdb.org
A website for OpenProphetDB community.
graph-builder
A Graph Builder for BioMedGPS Project
label-studio
Label Studio is a multi-type data labeling and annotation tool with standardized output format
label-studio-frontend
Data labeling react app that is backend agnostic and can be embedded into your applications — distributed as an NPM package
paper-downloader
A downloader for downloading papers and fetching related metadata for labeling.