Omar Almolla's repositories
Blacklist
Application for making ENCODE Blacklists
Language:C++GPL-3.0000
datasharing
The Leek group guide to data sharing
000
MAESTRO
Single-cell Transcriptome and Regulome Analysis Pipeline
Language:CGPL-3.0000
omar-almolla209
Config files for my GitHub profile.
Pipeline-for-Retrotransposons-LTR-retrieving-and-dating_in_Prunus_genomes
I create a pipeline to retrieving TEs LTR in plant genome as Prunus genomes and than dating the found TEs taking into account the changes accumulates between the LTR 5' and 3' of each retrotransposon. The main tools that I have used are: EDTA_raw.pl, ltr_digest and also an home made R script for dating.