Olivia Angelin-Bonnet (oliviaAB)

oliviaAB

Geek Repo

Company:The New Zealand Institute for Plant and Food Research Limited

Location:Palmerston North, New Zealand

Home Page:https://olivia-angelin-bonnet.netlify.app/

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Organizations
Plant-Food-Research-Open

Olivia Angelin-Bonnet's starred repositories

stat_rethinking_2022

Statistical Rethinking course winter 2022

mixOmics

Development repository for the Bioconductor package 'mixOmics '

GenNet

Framework for Interpretable Neural Networks

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:90Issues:6Issues:15

preNivolumabOnNivolumab

EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment

Omics

CRAN Task View: Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics

ReproducibleResearch

CRAN Task View: Reproducible Research

sklearn_tutorial

Materials for my scikit-learn tutorial

Language:Jupyter NotebookLicense:BSD-3-ClauseStargazers:10Issues:2Issues:0

MOSS

MOSS: Multi-Omic integration via Sparse Singular Decomposition

Language:RStargazers:7Issues:3Issues:0

Multi-omics-noise-resistance

More data, more problems? On noise resistance in multi-omics cancer survival models

Language:PythonLicense:MITStargazers:6Issues:1Issues:0
Language:HTMLLicense:GPL-3.0Stargazers:6Issues:0Issues:0

romic

romic represents high-dimensional measurements by persistently tracking features, samples, and measurements as a dataset is modified and reformatted. It provides a suite of functions that build on this framework to support data analysis and visualization. These functions are combined into shiny apps tailored to exploratory data analysis.

Language:RLicense:NOASSERTIONStargazers:5Issues:5Issues:53

OmicsAnalystR

R functions underlying OmicsAnalyst

Language:RLicense:MITStargazers:4Issues:3Issues:1

moiraine

An R package to construct Multi-Omics Integration Reproducible Analyses in R.

Language:RLicense:NOASSERTIONStargazers:3Issues:6Issues:0

Master_Thesis

Multi-view learning for multiomics data integration for the study of plants.

Language:PythonStargazers:1Issues:1Issues:0

MultiOmicsCompWorkflow

A computational workflow for multi-omics integration.

Language:RLicense:MITStargazers:1Issues:1Issues:0