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okjoh

okjoh

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mrtrix3

MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density

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ase_optimisation

Scripts used to produce Figure 3 (a-d) in streamlined-qBOLD paper

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bspmview

MATLAB program for viewing 3D fMRI statistical images

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congrads

Congrads is a data-driven method for mapping the spatial organisation of connectivity within a pre-defined region-of-interest (i.e. connectopic mapping) and fitting the results with a spatial statisical model that summarises the map in terms of a limited number of trend surface model coefficients.

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dipy

Diffusion MR Imaging in Python

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DPARSF

Docker version of DPARSF, also deployed at OpenNeuro.org

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iTT

iTT toolbox for SPM

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lavaan

an R package for structural equation modeling and more

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ldbounds

:exclamation: This is a read-only mirror of the CRAN R package repository. ldbounds — Lan-DeMets Method for Group Sequential Boundaries

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lmgs

MATLAB add-on to SPM software for fMRI detrending with the "Linear Model of the Global Signal" (LMGS) method.

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machine_learning_model

机器学习基本模型算法介绍(附加案例)

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MatlabTFCE

Standalone MATLAB implementation of permutation TFCE correction

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me-ica

Core code for ME-ICA command line interface

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osirixplugins

Plugins for OsiriX DICOM Viewer

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petpve12

PETPVE12: an SPM toolbox for Partial Volume Effects correction of PET images

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pTFCE

Probabilistic Threshold-Free Cluster Enhancement of Neuroimages

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SEMtutorialsR

Tutorials for doing structural equation modeling in R.

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STAMP

Statistical Analysis of Metagenomic Profiles

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streamlined_qbold_tools

Scripts used to produce quantitative maps of baseline brain oxygenation from FLAIR-GASE data. See streamlined-qBOLD paper for more info.

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SVR-LSM

Multivariate Lesion-Symptom Mapping Using Support Vector Regression

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svrlsmgui

A graphical multivariate lesion-symptom mapping toolbox

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