Dong-Ha Oh's repositories
OrthNet
CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on co-linearity between them. OrthNets enable detection of all orthologous gene groups that share the same evolutionary history, using a search based on network topology
Genome-Toolbox
Custom python scripts useful for working with genome assemblies and annotations
GenomeAlignmentTools
Tools for improving the sensitivity and specificity of genome alignments
machine-learning-cheat-sheet
Classical equations and diagrams in machine learning
make_lastz_chains
Portable solution to generate genome alignment chains using lastz
minimal
Minimal is a Jekyll theme for GitHub Pages
ohdongha.github.io
Personal page: https://ohdongha.github.io
Re-OrthNet
OrthNet constructed with the presence or absence of conservation in REgulatory features (user-defined) as the edges property (under construction)