Opening Reproducible Research

ctv-computational-environments

A CRAN task view for computational environments and reproducibility

o2r-badger

API for serving badges on reproducibility of research.

o2r-inspecter

Inspection of compendium details as part of the o2r Web API

o2r-bagtainers

o2r-bindings

Linking data, text, and code to make research results transparent and better accessible.

o2r-extender

Allows the integration of badges into several research websites and data repositories.

o2r-finder

Node.js implementation of search features for the o2r API

o2r-paperfinder

A script for automatically downloading and scanning PDFs which include code in R or Python

bagit

A npm module to support creation, modification and validation of bagit containers

binderhub

Run your code in the cloud, with technology so advanced, it feels like magic!

deglob

:open_file_folder: Take a list of glob patterns and return an array of file locations, respecting `.gitignore` and allowing for ignore patterns via `package.json`.

discovery

One of our goals is to provide new search capabilities. The following is a list of potential features.

dockerfiles

Dockerfiles for base images for executable research containers

extractR

mkdocs-combine

Convert an MkDocs Markdown source site to a single Markdown document

mongo-watch

Watches for changes in MongoDB replication log.

node-elasticsearch-sync

ElasticSearch and MongoDB sync module for node

o2r-contentbutler

Superseeded by https://github.com/o2r-project/o2r-transporter

o2r-summariser

o2r microservice for collecting summary statistics

o2r-supervisor

Collect status information from multiple microservices

o2r-transportar

Superseeded by https://github.com/o2r-project/o2r-transporter

pilots