Nadezda Volkova's repositories
mutationaccumulation
Codes for a publication about mutation accumulation in >60 DNA repair deficient C. elegant lines (Meier et al, under preparation).
signature-interactions
Codes and data for the manuscript "Mutational signatures are jointly shaped by DNA damage and repair"
phd
phd projects at EBI
PC-CHiP
Pan-cancer quantitative histopathology analysis using deep learning
MMR
C. elegans and ICGC cancer data analysis for Meier, Volkova et al. 2017 (http://www.biorxiv.org/content/biorxiv/early/2017/06/13/149153.full.pdf).
MutSim
R package for generating substitutions in genes
first-contributions
Helping you make your first pull request!
Rosalind
python solutions to Rosalind challenges
deepSNV
The official repository for the deepSNV bioconductor packages. Master is the active development branch. The devel branch is synchronised with the devel branch on the bioconductor svn and contains x.y.z versioned snapshots.
EMBL-co-occurrence
project for Patil group, SCB Unit, EMBL
Spoon-Knife
This repo is for demonstration purposes only.
btm-2016
Materials for Basic Teaching Module in Predoc Course 2016
Rcourse
Materials for my R programming course
btm-2015
Material for Basic Teaching Module (2015)