nuin

manning_course

mosdepth

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

alliancemine

bioconda-recipes

Conda recipes for the bioconda channel.

bluegenes

A friendly next-generation interface for Genomic data discovery powered by InterMine

couchdb-dump

Bash command line scripts to dump &restore a couchdb database

enrichment

GenGraph

A repository for the GenGraph toolkit for the creation and manipulation of graph genomes

IconPark

🍎Transform an SVG icon into multiple themes, and generate React icons，Vue icons，svg icons

intermine

A powerful open source data warehouse system

intermine-scripts

All scripts that used to be in the main intermine repository in bio/scripts and intermine/scripts

interop

C++ Library to parse Illumina InterOp files

manning_outliers

metrics_page_2

metrics_page_example

mojo

The Mojo Programming Language

new_pipeline

popgene.s2js

python-mastery

Advanced Python Mastery (course by @dabeaz)

python-nvd3

Python Wrapper for NVD3 - It's time for beautiful charts

PyVCF

A Variant Call Format reader for Python.

ROTLA

rtl8188eus-rpi

A RTL8188EUS driver cross compilation setup for Raspberry Pi

rustxml

scdefg

A single page Flask app with a GUI for performing differential expression with scvi-tools. Returns a volcano plot and downloadable tables with DE results.

Speed-up-your-Python-with-Rust

Speed up your Python with Rust, published by Packt

sphinx-action-test

Testing repo for my sphinx github action

wb-search

wb_file_generator

This file will be mainly used to generate files for populating WormMine

wormbase_rest

This is an API to the datomic database and provides data to catalyst on a per widget basis as well as information for tools like blast.