Nick Tustison's repositories
ANTsXMouseBrainMapping
The ANTsX Ecosystem for Mapping the Mouse Brain
PaperANTsX
But if you wait around awhile, I promise you
UKBiobank_deep_pretrain
Pretrained neural networks for UK Biobank brain MRI images. SFCN, 3D-ResNet etc.
ANTsEcosystemOverview
Brief introductory material showcasing R and Python wrapping of ANTs functionality
BraTS-Reg22
ANTsX evaluation in the BrATs-Reg22 challenge
DeezBrainz
Mining for doge chungus.
Histograms
Histograms should not be used to segment functional lung MRI
insightsoftwareconsortium.org
Sources for insightsoftwareconsortium.org website
ITK
Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
ITKR
port of ITK to R
keras_layers
Various Additional Keras Layers: SparseConv2D, PartialConv2D, GroupConv2D, DeformableConv2D, DepthwiseConv2D, MaxPoolingWithArgmax2D, MaxUnpooling2D, AddCoords2D, Blur2D, LayerNormalization, InstanceNormalization, WeightNormalization, Scale
keymorph
Robust multimodal brain registration via keypoints
Neural-Style-Transfer
Keras Implementation of Neural Style Transfer from the paper "A Neural Algorithm of Artistic Style" (http://arxiv.org/abs/1508.06576) in Keras 2.0+
PConv-Keras
Unofficial implementation of "Image Inpainting for Irregular Holes Using Partial Convolutions". Try at: www.fixmyphoto.ai
reproduce-chexnet
Reproduce CheXNet
SuperGluePretrainedNetwork
SuperGlue: Learning Feature Matching with Graph Neural Networks (CVPR 2020, Oral)
SuperPoint
Efficient neural feature detector and descriptor
symlrExamples
example scripts and pointers to data for testing symlr
wmh_ibbmTum
winning method for WMH segmentation challenge in MICCAI 2017