Nick Steinauer's repositories
awesome-quant
A curated list of insanely awesome libraries, packages and resources for Quants (Quantitative Finance)
awesome-reMarkable
A curated list of projects related to the reMarkable tablet
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
bds-files
Supplementary files for my book, "Bioinformatics Data Skills"
bioconda-recipes
Conda recipes for the bioconda channel.
BISCUIT_SingleCell_IMM_ICML_2016
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
inference-of-GRN-using-Fused-LASSO
Gene regulatory network inference using fused LASSO on multiple data sets: application to Escherichia coli
MAESTRO
Single-cell Transcriptome and Regulome Analysis Pipeline
MPAL-Single-Cell-2019
Publication Page for MPAL Paper 2019
posterdown
Use RMarkdown to generate PDF Conference Posters via HTML or LaTeX
qPCR
This simple R script standardizes the workflow for calculating expression levels from Delta CT values. Plots some nice looking graphs.
rChIPSeqTools
This is the package of R scripts using for ChIP-Seq data analysis
relapsed_AML
Scripts for data analysis in relapsed AML study
rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
scRNAseq_cell_cluster_labeling
Scripts to run and benchmark scRNA-seq cell cluster labeling methods
simpleSingleCell
Clone of the Bioconductor repository for the simpleSingleCell workflow, see http://bioconductor.org/packages/devel/workflows/html/simpleSingleCell.html for the official development version.
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
singlecellworkflow
Tutorial for the analysis of scRNA-seq data in R
split_seq
Pre-processing for SPLIT-Seq scRNA-Seq technology
statrethinking_winter2019
Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019
tests-as-linear
Common statistical tests are linear models (or: how to teach stats)
website
Personal academic profile