Nick Spies's repositories
adlm-fairlabs-competition
Public repository for 2024 ADLM 'FairLabs' data analytics competition
bmp_umap_paper
A repository for the article, "Automating the Detection of IV Fluid Contamination Using Unsupervised Machine Learning"
CIViC_data_summary
This code queries the CIViC API for all evidence items, filters out duplicated pubmed IDs, and returns counts of all parameters listed along with pie chart summaries in pdf format
contamination_simulation
A repository for the paper, "Impact and frequency of IV fluid contamination on basic metabolic panel results using quality metrics".
contamination_simulator
A shiny app that displays what a BMP result might look like if it had been contaminated by IV fluids.
educational_materials
A public repository for educational materials
FluidFlagger
An artificial intelligence platform for detecting laboratory results contaminated by intravenous fluids.
iv_fluid_contamination_ensembles
A repository for the article, "Prospective and External Validation of an Ensemble Learning Approach to Detecting Intravenous Fluid Contamination in Basic Metabolic Panels"
nicu_coag_reference_intervals
A repository for the code and data used for estimating neonatal-specific reference intervals for coagulations assays.
practical-machine-learning-in-the-clinical-laboratory
This repository serves as a publicly available resource for the site "Practical Machine Learning in the Clinical Laboratory", which is meant to supplement the concepts described in the article "Validating, Implementing, and Monitoring Machine Learning Solutions in the Clinical Laboratory Safely and Effectively".
R_helpers
A repository of commonly used R functions for informatics research