Niko Pinter's repositories
nLCplotSSH
Automated generation of pump plots after each measurement for Thermo easy-nLCs (tested with easy-nLC 1000) via SSH connection.
ProteoGenDB
ProteoGenDB: A Fast Proteogenomic Pipeline for Identifying Sequence Variants in Proteomics Data
bioconda-recipes
Conda recipes for the bioconda channel.
bitwarden_rs
Unofficial Bitwarden compatible server written in Rust
containers
Bioinformatics containers
cuteSV
Long read based human genomic structural variation detection with cuteSV
DiaNN
DIA-NN - a universal automated software suite for DIA proteomics data analysis.
diann-rpackage
Report processing and protein quantification for MS-based proteomics
enrichRoast
Repo containing scripts and functionts to run limma::roast enrichment analyses
FREEC
Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data
galaxy
Data intensive science for everyone.
galaxy_param_builder
Galaxy param builder
infrastructure-playbook
Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegalaxy-playbook/
multi-package-containers
Testing building mulled containers for multi-requirement tools.
ProteomeGenerator2
Precise, genome-scale, personalized, and sample-specific proteogenomic analysis
staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
TerrariumPI
Home automated terrarium/aquarium or other enclosed environment with a Raspberry Pi
tools-galaxyp
Galaxy Tool Shed repositories maintained and developed by the GalaxyP community
tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
usegalaxy-eu-tools
List of tools included in https://usegalaxy.eu
xbmc
Amazon Instant Video Addon for Kodi Media Center