NMDP

ngs

Next generation sequencing (NGS/HTS) tools.

py-ard

HLA ARD Reduction in Python

ImmunogeneticDataTools

Immunogenetic Data Tools related to HLA, GLStrings, Linkage Disequilibrium

grimm

GRIMM: Graph IMputation and Matching for HLA Genotypes

gfe-db

Graph database representing IPD-IMGT/HLA sequence data as GFE

phycus

Service used for curation of Haplotype Frequency

act-service

Allele Calling Tool (ACT)

seq-ann

Python package for doing fast and accurate sequence annotation

gfe-service

GFE Webservice: Provides REST endpoints to GFE related functions

imgt2aa

extract aligned amino acid sequences from IMGT/HLA

imgt_biosqldb

The IMGT/HLA sequence data persisted in a BioSQL database

gfe-docker-compose-app

GFE service and GFE Database Docker Compose

hapi-fhir

HAPI FHIR - Java API for HL7 FHIR Clients and Servers

py-graph-imputation

Graph Imputation

service-feature

Enumerated sequence feature service.

act-client

Python client for working with the ACT service

hml-validation-portal

Portal for HML validation

nmdp-bioinformatics.github.io

Organization Website for NMDP Bioinformatics

py-gfe

Python package for creating GFE notation from annotated sequences

py-grimm

tarr2fhir

Convert tarr2fhir Sync4Genes - Versiti and GenDx

dpb1-prediction

DPB1 and TCE Prediction

nmdp-python-project-template

Python project template for NMDP Bioinformatics

dpb1-expression

DPB1 expression Tool

homebrew-tap

Tap to install nmdp-bioinformatics software for Homebrew

kafka-producer

py-graph-em

Python graph based Expectation Maximization

py-graph-match

Graph Match

pyard-legacy

Legacy pyard repo. Not used anymore

service-ard