nipy / nireg

Brain image registration package

NIREG

Image registration package for Python.

Website

Current information can always be found at the NIPY project website.

Mailing Lists

For questions on how to use nipy or on making code contributions, please see the neuroimaging mailing list:

https://mail.python.org/mailman/listinfo/neuroimaging

Please report bugs at github issues:

https://github.com/nipy/nireg/issues

You can see the list of current proposed changes at:

https://github.com/nipy/nireg/pulls

Code

You can find our sources and single-click downloads:

• Main repository on Github;
• Documentation for all releases and current development tree;
• Download the current development version as a tar/zip file;
• Downloads of all available releases.

Tests

To run nipy's tests, you will need to install the nose Python testing package. Then:

python -c "import nireg; nireg.test()"

Dependencies

To run NIREG, you will need:

• python >= 2.5 (tested with 2.5, 2.6, 2.7, 3.2, 3.3)
• numpy >= 1.2
• scipy >= 0.7.0
• nibabel >= 1.2

You will probably also like to have:

• ipython for interactive work
• matplotlib for 2D plotting
• mayavi for 3D plotting

License

We use the 3-clause BSD license; the full license is in the file LICENSE in the nipy distribution.