nihaowxh

unilm

Large-scale Self-supervised Pre-training Across Tasks, Languages, and Modalities

multimodal

TorchMultimodal is a PyTorch library for training state-of-the-art multimodal multi-task models at scale.

GBPNet

TripletProt

Deep Representation Learning of Proteins based on Siamese Networks

CPCProt

Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.

EDGEPack

MCLEA

pytorch-summary

Model summary in PyTorch similar to `model.summary()` in Keras

protein-sequence-models

neurips19-graph-protein-design

Generative Models for Graph-Based Protein Design

gvp-pytorch

Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure

torchdrug

A powerful and flexible machine learning platform for drug discovery

paper-reading

深度学习经典、新论文逐段精读

MMRNS

Code of the paper Relation-enhanced Negative Sampling for Multimodal Knowledge Graph Completion (ACM MM22))

pykeen

🤖 A Python library for learning and evaluating knowledge graph embeddings

MMGL

Multi-modal Graph learning for Disease Prediction (IEEE Trans. on Medical imaging, TMI2022)

dgl-ke

High performance, easy-to-use, and scalable package for learning large-scale knowledge graph embeddings.

pyHGT

Code for "Heterogeneous Graph Transformer" (WWW'20), which is based on pytorch_geometric

OntoProtein

[ICLR 2022] OntoProtein: Protein Pretraining With Gene Ontology Embedding

goPredSim

qagnn

[NAACL 2021] QAGNN: Question Answering using Language Models and Knowledge Graphs 🤖

BERT-based-Summ

BERT-based Biomedical Text Summarizer

scifact

Data and models for the SciFact verification task.

detecting-scientific-claim

Extracting scientific claims from biomedical abstracts (powered by AllenNLP)

pytextrank

Python implementation of TextRank algorithms ("textgraphs") for phrase extraction

isimp

A sentence simplification system

KGen

Knowledge graphs generation from unstructured text.

Seq2KG

A neural model for knowledge graph construction from text.

AutoSubClause

Automatic subordinate clause extractor

covid19-text-network