Nigel Michki (nigeil)

nigeil

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Organizations
Cai-Lab-at-University-of-Michigan

Nigel Michki's repositories

netctl-auto-gnome

Netctl Menu is a Gnome 3 extension that allows you to switch between netctl profiles using a menu in the notification area.

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max114_driver

C++/Arduino code to interface microcontrollers with Max114/Max118 multi-channel ADCs

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python-bioinformagic

Putting the info back in bioinformatics.

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scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

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alacritty

A cross-platform, OpenGL terminal emulator.

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anndata

Annotated data.

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cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

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dash

Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.

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lablog

A quick and open electronic laboratory notebook, aimed at replacing physical laboratory notebooks for computational scientists.

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llama-cpp-python-cuBLAS-wheels

Wheels for llama-cpp-python compiled with cuBLAS support

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MCM2015-ebola-medicine-distribution-model

A model in Python that we attempted to use to model the spread of Ebola in west Africa for the MCM2015 competition.

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montecarlo-data-fitting

Generates feasible guesses at parameters for fitting functions when you don't have any.

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NeoPixelBus

Adafruit enhanced NeoPixel support library

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nmwizConverter

Takes in a pdb file and vibrational mode data from CHARMM and returns a nmd file for use with NormalModeWizard in VMD

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numpy

Numpy main repository

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rpi-ledstrip

Python code for an MQTT controlled ledstrip.

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sonic-pi

Sonic Pi - Audible Computing

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STAR

RNA-seq aligner

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task

A CLI task (todo list) manager application for the terminal (Linux, Mac OS X or cygwin). This repository here is just a mirror of the main, "master", repository that can be found at

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