nickhsmith's repositories
AMLnetwork
AML network
bimm185
bimm 185 code and files
bioconda-recipes
Conda recipes for the bioconda channel.
drop
Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
FRASER
FRASER - Find RAre Splicing Events in RNA-seq
iC10
:exclamation: This is a read-only mirror of the CRAN R package repository. iC10 — A Copy Number and Expression-Based Classifier for Breast Tumours
markdown-docs
GitHub action for generating markdown docs for python code
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nf-co.re
Code and files for the main nf-core website.
OUTRIDER
OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.