Nils Homer (nh13)

nh13

Geek Repo

Company:@fulcrumgenomics

Home Page:https://www.linkedin.com/in/nilshomer

Twitter:@nilshomer

Github PK Tool:Github PK Tool


Organizations
bioconda
conda-forge
conda-incubator
fulcrumgenomics
nf-core
samtools

Nils Homer's starred repositories

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IGV

Integrative Genomics Viewer. This is a mirror of the main repository (code.google.com/p/igv), being used for testing purposes only.

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samtools

Tools (written in C using htslib) for manipulating next-generation sequencing data

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crammer

Reference-based compression of SRA data

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igv

Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations

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gatk

GATK Official Release Repository

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homebrew

The missing package manager for OS X.

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fermi

A WGS de novo assembler based on the FMD-index for large genomes

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sga

experimental de novo sequence assembler using string graphs

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filesize

Large File Support Testing for Mac OS X Lion

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bwa

Burrow-Wheeler Aligner

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SRMA

Short-read Micro-Aligner

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BFAST

BFAST: the Blat-like Fast Accurate Search Tool

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DWGSIM

Whole Genome Simulator for Next-Generation Sequencing

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TMAP

Torrent Mapping Alignment Program

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euler

Solutions to http://projecteuler.net

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bwa

Burrow-Wheeler Aligner

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gatk

Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

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samtools

This is *NOT* the official repository of samtools.

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bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

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sga

de novo sequence assembler using string graphs

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legacy-homebrew

đź’€ The former home of Homebrew/homebrew (deprecated)

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