Beast code in Giters

ngocemy's repositories

MCC_mouse

in collaboration with Alice Meunier

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CoursCancerSystemBiology

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CoursEpigenomicsENS2020

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CoursTranscriptomicsENS2020

TravailPratique

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DAGWS

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HBV_HCC_cancer

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pareidolia

Multi-sample change detection in Hi-C patterns

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polyidus

Polyidus provides a framework to catch chimeric DNA sequences with a tale of python

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TP-meta3C

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ATACseq-Snakemake

Standard Parker Lab ATAC-seq processing pipeline in Snakemake form

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chromosight

Detect chromatin loops (and other patterns) in Hi-C contact maps

Language:PythonGPL-3.0000

CRCT

Internship for Bachelor thesis in Centre de Recherche en Cancerologie de Toulouse, France

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gat

Genomic Association Tester

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hicstuff

Simple library/pipeline to generate and handle simple Hi-C data

Language:PythonGPL-3.0000

HiNT

HiC for copy Number variation and Translocation detection

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keras

Deep Learning for humans

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notebooks

code for deep learning courses

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pyflow-ATACseq

ATAC-seq snakemake pipeline

Language:PythonMIT000