nglviewer / nglview

Jupyter widget to interactively view molecular structures and trajectories

http://nglviewer.org/nglview/latest/

nglviewer/nglview Issues

Transparent shapes
Updated 2 days ago1
Color all sidechain but heavy atoms
Updated 5 days ago2
How to hide a selected residue?
Updated 15 days ago
Doesn't seem to work with google colab
Updated 16 days ago2
A problem when running html result
Updated a month ago1
write_html seems to be broken
Closed 2 months ago1
Protein not showing as ribbons
Closed 2 months ago1
VSCode : receiving java script error while running nv.demo()
Updated 3 months ago13
nglview 3.1 not working with nbclassic 1.0
Updated 4 months ago1
Visualizing arrows defined by atoms positions along a trajectory
Updated 4 months ago1
Issue during rendering when using MovieMaker on NGLView
Closed 5 months ago6
No widget renders on Jupyterlab 4.1
Closed 6 months ago8
Support `inferBonds` parameter in PDB files
Updated 7 months ago4
slow shape.add_cylinder
Closed 7 months ago1
Component handling not working properly under Google Colab
Closed 7 months ago4
Display NGLViewer when kernel is running
Closed 7 months ago6
Quarto support
Closed 7 months ago1
No molecules displayed
Closed 7 months ago11
jupyterlab chokes on colorbrewer JS shipped with nglview
Closed 7 months ago3
Nglview not showing
Closed 7 months ago9
follow up problem on rendering data and saving it to file ( based on FAQ: How to make nglview view object write PNG file?)
Closed 7 months ago9
Wrong mode in MrcParser with MRC density map file
Closed 7 months ago12
Notebook 7 surface view error
Closed 7 months ago3
memory address error when rendering image from nglview
Closed 7 months ago3
upgrade nglview so will work with ipywidgets 8 or greater?
Closed 7 months ago9
vscode generates empty image
Closed 8 months ago5
custom rgb color
Closed 8 months ago4
How to load both surface point and protein at the same time?
Closed 8 months ago2
Compatibility with jupyterlab 4
Closed 8 months ago6
nv.write_html doesn't show any molecule.
Closed 9 months ago8
Load MD trajectory with controls
Closed 9 months ago2
Visualization of an MDAnalysis Universe resets its translation
Updated 9 months ago1
jupyter_client version regression
Closed a year ago4
Unable to run nglview in my browsers
Closed a year ago7
`DeprecationWarning` from `traitlets`
Updated a year ago1
ACE and NME have different representations from the rest of the molecule
Closed a year ago4
JavaScript errors with latest nglview/ipywidgets/jupyterlab versions persist?
Closed a year ago4
Save to png
Closed a year ago3
Support `nbconvert --execute`
Closed a year ago15
Facing an issue to view the structure of a model by using 'nv.show_biopython(structure)'
Closed a year ago2
New release
Closed a year ago7
nv.demo() does not show anything
Closed a year ago1
Change color when clicked
Closed a year ago1
JavaScript error with JupyterLab and new ipywidgets
Closed a year ago6
Change to different model in multimodel PDB file
Closed a year ago1
nglview run error
Closed a year ago1
Installation issue
Closed a year ago1
show_html function not working, nglview-js-widget.js missing/404 error
Closed a year ago2
AttributeError: 'Atom' object has no attribute 'write
Closed 2 years ago
frame in trajectories
Closed 2 years ago2