nfdi4plants / ARCtrl

Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.

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[Bug]: Loading old isa.assay/study.xlsx files doesn't convert Input/Output column

caroott opened this issue · comments

Contact Details

No response

What happened?

Importing an old assay or study file with an Input or Output that doesn't fit a name from this list:
image
just imports the column without adding Input[ ] or Output[ ] around the name and doesn't throw an error that input or output is missing.

What did you expect?

I expected that swate wraps the first and last column in Input[ ] / Output[ ] or throws an error if either one is missing.

Host

Standalone

Host Details

OS: Windows 11
Browser: Firefox Version 122.0.1 (64 Bit)

Swate version

Swate Release Version v1.0.0-alpha.12

@HLWeil I thought we had support for old input/output columns? Or was this removed for performance reasons?

What exactly is written in the old input/output column? We are catching all headers written here with deprecation handling:

image

@caroott

The old output column was "Data File Name"

And what about input? was the input correctly read?

The input was "Source Name" and was correctly read and converted to "Input [Source Name]"