Pipeline fails if only CONCOCT is turned on and other binners off
jfy133 opened this issue · comments
James A. Fellows Yates commented
Description of the bug
Fails due to the if/else statement around input to SPLIT_FASTA in binning.nf only consideres maxbin2 and/or metabat or both (CONCOCT does not produce 'unbins'). Should add logic to account for this, and allow pipeline to continue even after without SPLIT_FASTA
Command used and terminal output
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Relevant files
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System information
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