nf-core / mag

Assembly and binning of metagenomes

Home Page:https://nf-co.re/mag

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Add StrainXpress assembler

maxibor opened this issue · comments

Description of feature

StrainXpress: strain aware metagenome assembly from short reads

Paper: https://academic.oup.com/nar/article/50/17/e101/6625806
Repo: https://github.com/HaploKit/StrainXpress
Bioconda package: not yet but maybe kangxiongbin/StrainXpress#12

Excerpt from the StrainXpress paper: