Tiara is not included in bin_summary
maxibor opened this issue · comments
Maxime Borry commented
Description of feature
Tiara results are not reported in the BIN_SUMMARY process.
It would be nice to have it included to centralize the bin domain classification information.
Similarly to #535 it would require adding the functionality to the bin/combine_tables.py
script (ie. merging the ``tiara_summary.tsvfile produced by the
TIARA_SUMMARY` process)
Maxime Borry commented
Example tiara_summary.tsv
file (only the classification column would be really needed):
BinID Prokarya Eukarya Organelle Unknown classification
MEGAHIT-MaxBin2-SZG018.001 NA 0 0 0 eukarya
MEGAHIT-MaxBin2-SZG018.002 1 3.4581592393601363e-209 3.457377783679859e-209 3.457377783679859e-209 prokarya
MEGAHIT-MaxBin2-SZG018.003 1 2.4125912832761363e-144 2.06802364667377e-144 2.067864414983475e-144 prokarya
MEGAHIT-MaxBin2-SZG018.004 1 2.116318385201147e-290 2.116318385201147e-290 2.116318385201147e-290 prokarya
MEGAHIT-MaxBin2-SZG018.005 1 2.526564404493635e-166 2.228376456618079e-175 2.2283541729649312e-175 prokarya
MEGAHIT-MaxBin2-SZG018.006 0 NA 0 0 prokarya
MEGAHIT-MaxBin2-SZG018.007 1 1.598405662291841e-104 1.5982793932322138e-104 1.5982793932322138e-104 prokarya