In this repository I'm playing with data and code provided by Loog et al 2017 for their paper
Loog, L., Lahr, M. M., Kovacevic, M., Manica, A., Eriksson, A., & Thomas, M. G. (2017). Estimating mobility using sparse data: Application to human genetic variation. Proceedings of the National Academy of Sciences, 114(46), 12213–12218. https://doi.org/10.1073/pnas.1703642114
Code and data are available here: https://github.com/LiisaLoog/SpaceTime-Framework (@LiisaLoog) Supplementary material: https://www.pnas.org/highwire/filestream/624605/field_highwire_adjunct_files/0/pnas.1703642114.sapp.pdf
The result of my examination might be an interactive document like the one here.
What I have done so far:
- Translation of the 2D mobility model with constant migration rate from Python to R.