nellh / openneuro

A free and open platform for analyzing and sharing neuroimaging data

OpenNeuro

About

OpenNeuro is a free and open platform for analyzing and sharing neuroimaging data. It is based around the Brain Imaging Data Structure specification.

Development setup

This project is managed with Lerna and Yarn. To get started, install Yarn and bootstrap the repo.

yarn install && yarn bootstrap

You can run tests with yarn test at the top level of the project. For each package, yarn test --watch will interactively run the tests for changes since the last commit.

docker-compose is used to run a local copy of all required services together. Copy the example .env.example file to .env and config.env.example to config.env and start with the script.

./start-dev

Components

• OpenNeuro app - React frontend.
• OpenNeuro server - Node.js web backend.
• OpenNeuro deployment scripts - Docker-compose scripts and configuration to deploy the system.
• SciTran - Dataset management backend.
• bids-app-host - Docker wrapper for cloud hosted job execution.
• bids-validator - BIDS validation library.