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Connor lab (neidl-connor-lab)

Connor lab

neidl-connor-lab

Geek Repo

Tools from John Connor's lab @ the NEIDL

Location:United States of America

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Connor lab's repositories

virus-shotgun

Characterize virus stocks

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lasvShiny

This Rshiny app allows users to explore protein multiplex data from Lassa fever patients in Nigeria. Main findings published in The Lancet Infectious Dieases: https://www.thelancet.com/journals/laninf/article/PIIS1473-3099(20)30737-4/fulltext

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virus-amplicon

Processing data from virus genome amplicon sequencing

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alpha-spring2021

Analysis of the alpha VoC on the BU campus

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athletic-cluster

Bioinformatic methods for iScience paper "Understanding SARS-CoV-2 transmission: Linking traditional contact tracing with genomic surveillance of a SARS-CoV-2 student cluster on a large urban campus"

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loop_snooper

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snv-clustering

Clustering samples via pairwise comparison of SNV sets

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transcriptomics-bulk

Jackie's bulk RNA-seq workflow

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