neelsmith / VectorAlignments.jl

Simple utilities for comparing and aligning vectors.

VectorAlignments.jl

Simple utilities for comparing and aligning vectors.

Compare vectors with any kind of content for longest common subsequence, shortest common supersequence, and alignments.

Overview

julia> using VectorAlignments

julia> lcs("ab", "abc")
2-element Vector{Any}:
 'a': ASCII/Unicode U+0061 (category Ll: Letter, lowercase)
 'b': ASCII/Unicode U+0062 (category Ll: Letter, lowercase)

julia> scs("ab", "abc")
3-element Vector{Any}:
 'a': ASCII/Unicode U+0061 (category Ll: Letter, lowercase)
 'b': ASCII/Unicode U+0062 (category Ll: Letter, lowercase)
 'c': ASCII/Unicode U+0063 (category Ll: Letter, lowercase)

julia> align("bc","abc")
2-element Vector{Any}:
 Any[nothing, 'b', 'c']
 Any['a', 'b', 'c']

julia> featurematrix("bc","abc")
3×2 Matrix{Any}:
 nothing  'a'
 'b'      'b'
 'c'      'c'

See the documentation for more details.