Wei Zhang's repositories
PathogenTrack
A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.
Yeskit.old
A Tookit for scRNA data Exploration and Visualization
AML-CRNDE-Analysis
Oncogenic role of lncRNA CRNDE in acute promyelocytic leukemia and NPM1-mutant acute myeloid leukemia
bioconda-recipes
Conda recipes for the bioconda channel.
cellranger
Helper functions to work with spreadsheets and the "A1:D10" style of cell range specification
CIRCexplorer2
circular RNA analysis toolset
clusTCR
CDR3 clustering module providing a new method for fast and accurate clustering of large data sets of CDR3 amino acid sequences, and offering functionalities for downstream analysis of clustering results.
Contributions
Contribute Packages to Bioconductor
DropletUtils
Clone of the Bioconductor repository for the DropletUtils package.
dyno
Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕
emg-viral-pipeline
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
free-programming-books-zh_CN
:books: 免费的计算机编程类中文书籍，欢迎投稿
github-profile-views-counter
It counts how many times your GitHub profile has been viewed. Free cloud micro-service.
immunarch
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
kraken2
The second version of the Kraken taxonomic sequence classification system
MiddleClick
Emulate a middleclick with triple tap on MacBook trackpad and Magic Mouse.
miR-island
an ultrafast and memory-efficient tool for plant miRNA annotation
scasa
SCASA: Single cell transcript quantification tool
scRepertoire
A toolkit for single-cell immune profiling
scRNA-seq-workshop
single cell RNA-seq analysis workshop
seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
shields
Concise, consistent, and legible badges in SVG and raster format
show-me-the-code
Python 练习册，每天一个小程序
single-cell-rna-seq
A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.
STARTRAC
STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)
TCR-BCR-seq-analysis
T/B cell receptor sequencing analysis notes