Naturalis Biodiversity Center's repositories
galaxy-tool-taxonmatcher
Find for your input taxonomy the taxonomy from an other database
barcode-constrained-phylogeny
Pipeline for building topologically-constrained phylogenies from DNA barcode data
DWCAConfig
DWCA Configuratie bestanden om data te downloaden uit ES (NBA)
mycodiversity
Pipelines for analyzing fungal diversity
seshat-trait-data-domesticates
Repository for aggregating comparative trait data for Ungulates and Poaceae and preparing for submission to the SESHAT database
mtdna-reference-database
Reference database of panels of genomes for population-level aDNA identification
arise-metabarcoding-biodiversity
ARISE metabarcoding
arise-soil-pilot-analysis
Repository for statistical analysis of spatial structure in the ARISE soil pilot
barcode-classify-protax-fungi
Profiling PROTAX-fungi for quick and coarse classification of ITS metabarcoding reads
barcode-phylogenetic-diversity
Repository for experiments with QIIME-based alpha/beta PD metrics
barcode-validator
Standardized validation of barcodes
bioblend-test
Example implementation of bioblend galaxy client
comp-genome-mammals-cmah
Repository for the comparative analysis of CMAH inactivation in Mammalian genomes
galaxy-pipeline-hybseq
End-to-end implementation of HybSeq analysis in Naturalis's Galaxy portal
galaxy-tool-BLAST
A new tool and wrapper for the identification with blastn
galaxy-tool-sickle-pe
Galaxy wrapper for sickle paired-end trimming, input is a zip file
kiore-project
Genomic signatures of the Polynesian rat retrace the Austronesian expansion
sysbio-independent-contrasts
Demonstration of independent contrasts calculations for spider length dimorphism