Nathaniel Maki's repositories
awesome-nextflow
A curated list of nextflow based pipelines
blast_xml_parse
This is a small python script to parse the results of a large BLAST XML file.
benfordParse
Repo for Benford Law parsing
bioinfokit
Bioinformatics data analysis and visualization toolkit
bioinformatics_online
Resource list and preparation instructions for online learning and teaching for Bioinformatics
computer-science
:mortar_board: Path to a free self-taught education in Computer Science!
cwl_development
a test repository to explore re-organizing and re-structing biocore_analysis
cwl_tutorial
A brief intro to CWL and its usage, provided by commonwl.org
dactl
Modern, fast and configurable Jekyll theme with some tricks up it's sleeve.
English-Persian-Word-Database
English Persian Word Database - Popular database extensions
equidock_public
EquiDock: geometric deep learning for fast rigid 3D protein-protein docking
Files
A modern file explorer that pushes the boundaries of the platform.
genomics-r-intro
Intro to R and RStudio for Genomics
GSEApy
Gene Set Enrichment Analysis in Python
gseautomate
Repo to manage automation of GSEA through gseapy software and extensions
Intro-to-rnaseq-hpc-salmon-flipped
Introduction to bulk RNA-seq
jekyll-theme-prologue
A Jekyll version of the "Prologue" theme by HTML5 UP
Landmarks
Repo for Swift tutorial
ml_tutorials
repo for tensorflow and keras tinkering
molmil
WebGL based molecular viewer
netZooR
netZooR is a network biology package implemented in R.
r-novice-inflammation
Programming with R
uiTest1
repo to test basic ui customization in WinUI 3.0
ZeroCostDL4Mic
ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy