Errors using python 3.11

[Walter Santana]

Hi all. I received the next error message after running bonito --help and any other command with python 3.11 (bonito installed with pip). I went back to python 3.10 and this fixed the error. Hope this helps.

ValueError: mutable default <class 'numpy.ndarray'> for field sd_arr is not allowed: use default_factory

[Chris Seymour]

@santanaw this should be fixed in v0.7.2.

$ python3.11 -m bonito --help
usage: bonito [-h] [-v] {basecaller,train,evaluate,view,convert,download,export,duplex} ...

options:
  -h, --help            show this help message and exit
  -v, --version         show program's version number and exit

subcommands:
  valid commands

  {basecaller,train,evaluate,view,convert,download,export,duplex}
                        additional help