mychan24

r-for-brain-network

Analyze brain surface/volume (gifti, cifti, nifti) in R and extract networks

invoiceR

Use R to generate PDF invoices and save income data into csv file

system-segregation-and-graph-tools

System segregation (see Chan et al. 2014 PNAS) and RSFC brain network tools

git_github_bookdown

Git & GitHub for scientists tutorial (bookdown ebook)

Chan_RSFC_Nodes

Resting-state Functional Correlation (RSFC) node set (Chan et al. 2014 PNAS)

covid_texas_trend

COVID-19 positive test rate trend in Texas Counties

dotfiles

git_github_workshop

git/github workshop & accompanied bookdown tutorial available

restinginpca

ADcortsig-roi

Alzheimer disease cortical signature ROIs and cortical signature thickness measure calculation

adv-r

Advanced R: a book

asciidoc_test

asciidoctor

:gem: A fast, open source text processor and publishing toolchain, written in Ruby, for converting AsciiDoc content to HTML 5, DocBook 5, and other formats.

bctr

Brain Connectivity Toolbox (BCT) in R

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

bids-validator

Validator for the Brain Imaging Data Structure

clmystery

A command-line murder mystery

clpipe

Python pipeline for neuroimaging data

covid19_google_mobility_map

Percent change from Jan-Feb median in mobility (data scraped from google.com/covid19/mobility/ PDFs)

deepdive

https://mychan24.github.io/deepdive/

flexplot

flexplot: graphical data analysis

gitbook_redirect

heudiconv

A flexible DICOM converter for organizing brain imaging data into structured directory layouts

iframe_shiny

test using iframe to embed shinny app from shiny.io

mixOmics

Master and devel repo for mixOmics on BioC

neurohcp

Human Connectome Project Interface with R

stats_blog

STOP-IT

tools

Assorted tools/code/scripts I don't know where else to put

website_quarto

Mic's personal website