mwshinn

paranoidscientist

Runtime software verification and automated testing for scientific software in Python

PyDDM

A drift-diffusion modeling (DDM) framework for Python

spatiotemporal

Tools for spatial and temporal autocorrelation

figures_from_pca_paper

CanD

versatility

How well a node in a graph is affiliated with a community

forceatlas2-python

A port of Gephi's ForceAtlas2 graph layout algorithm to Python and NetworkX. See the bzr page for updates.

worldtime

Source for worldti.me

noise

Perlin noise library for Python

AwesomeTTS

Text-to-speech add-on for Anki

awesometts-anki-addon

AwesomeTTS text-to-speech add-on for Anki

blog

coppafish

Python version of iss software

facemap

matlab/python GUI for unsupervised video analysis of rodent behavior (capable of processing multiple camera views)

figures_from_dip_paper

iblutil

Small utilities with minimal dependencies

iss

Code for analysis of in situ sequencing

issjobs

Job queuing system for the ISS software

language-notes3

Notes3 Flavored Markdown in Atom

mpl-interactions

Sliders to control matplotlib and other interactive goodies. Works in any interactive backend and even uses ipywidgets when in a Jupyter notebook

mwshinn.github.io

nndarray

Named numpy NDArrays

perlin_stimuli

PsychRNN

pykilosort

[WIP] Python port of Kilosort 2

rotanova

scipy

Scipy library main repository

spam-filter-hn

Filter spam on HN from specific domains

tifffile

Read and write TIFF files. Forked from https://pypi.org/project/tifffile

yale_phd_thesis_template

Latex template and class files for a Yale PhD thesis.