mvfki

assignments

Some assignments I've done, but scripts are generalized so they are not necessarily in the required format for courses.

gitUpstreamTracker

A simple web crawler with a gmail sender, in order to periodically track changes in a repo

mvfki.github.io

Yichen Wang's Personal Home Page

pyHiliter

Replacements on some Pygments lexers that matches my flavor

BullshitGenerator

Generate random text paragraphs (Chinese) for given topic (fixed phrase). Standard Python 3 Package version.

cstr

Unix Terminal Colored str Object

drawCNV

Visualization of CNV distribution organized in genomic ordering, using scRNAseq data.

liger

R package for integrating and analyzing multiple single-cell datasets

singleCellTK

Interactively Analyze scRNA-Seq Data

YEPT

YEast Primer Tool

leidenAlg

Implements the Leiden algorithm via an R interface

leidenbase

mams

Matrix and Analysis Metadata Standards

patina

A simulator of the fact that old Android OS make the images greener due to a bug in old Google's Skia library.

presto

Fast Wilcoxon and auROC

SCTK2

Manuscript for SCTK2.0

shiny-directory-input

An shiny input widget for selecting directories

SiNMFiD

SoupX

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data

streamRWrapper

Wraps Python3 functions into R commands so that people can run STREAM based single-cell analysis in R and do anything else they like.

Test

test all kinds of stuffs here

Yesprit

Primer design tool for fission yeasts. Executable files are available here https://github.com/Sugiyama-Lab/Yesprit/releases