mukundraj / broad-registration

Scripts for slideseq-niccl registration

broad-registration

Scripts for slideseq-niccl registration

Dependencies

• https://command-not-found.com/pigz
• rmarkdown
• https://github.com/dmcable/RCTD
• SeuratObject
• Seurat

Commands

• For recording environment conda env export > environment.yml

• For recreating environment conda env create -f environment.yml and conda env create --force -f environment.yml