mshadbolt

anatomy-of-morbidity-project

The HackSeq18 Anatomy of Morbidity project space

about-me

A website to describe my experience and skills

Ae_aegypti-toolset

Set of scripts to aide Aedes aegypti genomic analyses

beacon-v2

Unified repository for Beacon v2 Components - Under Construction

beacon2-ri-tools

Beacon v2 Reference Implementation (Data ingestion tools)

biotool

Template bioinformatics script in various languages based on "Ten recommendations for creating usable bioinformatics command line software" by Torsten Seemann (http://www.gigasciencejournal.com/content/2/1/15)

CanDIGv2

The CanDIG v2 platform

candigv2-ingest

cell-ontology

An ontology of cell types

d3heatmap

dbot-demo

🤖 Fork me to try out Dependabot

dcp-cli

HCA Data Coordination Platform Command Line Interface

DUO

Ontology for consent codes and data use requirements

elixir-toolkit-theme

Flexible Jekyll theme using bootstrap 5 as CSS framework.

elixir-toolkit-theme-example

Example of ELIXIR toolkit theme as a remote jekyll theme

fega-mm

gen3-helm

Helm charts for Gen3 Deployments

human-omics-data-sharing-field-guide

Prototype for Human Genomics Data Sharing Field Guide Website

isomiRs

analyze isomiRs from seqbuster tool

katsu

Phenopackets/FHIR-based metadata service for the Bento platform. Docs: https://metadata-service.readthedocs.io

latex-novice

Introductory LaTeX workshop for ResBaz/SWC.

manhattanly

mshadbolt.github.io

Build a Jekyll blog in minutes, without touching the command line.

oneliners

Useful bash one-liners for bioinformatics.

phenopacket-schema

Repository for the GA4GH phenopacket schema

README-template.md

A README template for anyone to copy and use.

sbeacon-exploration

Serverless Beacon v2 exploration for UMCCR use cases

schema-template-generator

Interactive UI for generating metadata schema templates

test-heroku

app to see how heroku app hosting might work

who-am-i

All about me