mrsbighead

TextBlob

Simple, Pythonic, text processing--Sentiment analysis, part-of-speech tagging, noun phrase extraction, translation, and more.

Data-Science-Cheatsheet

GetOldTweets-python

A project written in Python to get old tweets, it bypass some limitations of Twitter Official API.

moses

Molecular Sets (MOSES): A Benchmarking Platform for Molecular Generation Models

catalyst

🚀 Catalyst is a C# Natural Language Processing library built for speed. Inspired by spaCy's design, it brings pre-trained models, out-of-the box support for training word and document embeddings, and flexible entity recognition models.

Bios8366

Advanced Statistical Computing at Vanderbilt University Medical Center's Department of Biostatistics

tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

CERR

Matlab/Octave based platform for Radiological Research.

DeepLIIF

Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]

OBOFoundry.github.io

Metadata and website for the Open Bio Ontologies Foundry Ontology Registry

ontobio

python library for working with ontologies and ontology associations

awesome-biological-image-analysis

A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.

cellfie-plugin

Protégé plugin for creating OWL ontologies from spreadsheets

MSIfromHE

predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer

lstm_lyrics

LSTM text generation by word. Used to generate lyrics from a corpus of a music genre.

SlideSeg

A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.

hact-net

jupyturtle

Python Turtle graphics for Jupyter notebooks

Public-Transport-SP-Graph-Database

Metropolitan Transport Network from São Paulo mapped in a NoSQL graph database.

Texomer

Texomer: Integrating Analysis of Cancer Genome and Transcriptome Sequencing Data

nurds

New Ultimate Roller Derby Simulator

UnknownPleasuresGenerator

Python script that generates a graph similar to the one on the cover of the album Unknown Pleasures by Joy Division. The original cover was based on an image of radio waves from pulsar CP 1919, from The Cambridge Encyclopaedia of Astronomy.

MetroloJ_QC

Keyword-Extraction-for-Pathology-Reports-with-BERT

Keyword Extraction for Pathology Reports with BERT

onto2nx

Converts OWL ontologies and OBO to NetworkX Graphs

i2k_2022_zeiss

This repo contains all the material for the I2K 2022

owl-nets

Transforming OWL for statistical learning

OOSTT

The Ontology of Organizational Structures of Trauma centers and Trauma systems

medinfo2019

Medinfo 2019: Hands-On Full Life Cycle Data Science Tutorial

MedInfo-2019