Mohamed Abuelanin's repositories
denovo-rnaseq
De novo assembly, Differential gene expression, and annotation workflow
duplicate_images_detector
Detect duplicate images and view the distinct in a web app
sourmash_plugin_extract_errors
Find kmers that appeared once in a pool of sourmash signatures
sourmash_plugin_subtract_and_inflate
Subtract two signatures and generate an inflated signature (recover abundance)
sra_size_plot
Up-to-date SRA growth size visualization
2024-07-1KG-analysis
Analysis of the 1KG project
2024-sra-sourmash
A simple snakemake workflow to download and sketch SRA sequencing runs
bioconda-recipes
Conda recipes for the bioconda channel.
confidata
A secure distributed file system with multi-layered protection and dual authorization.
dumb_Index
better don't have a look, this is boring
hashspace_parallel_indexing
multithreading indexing by splitting the hash space
hugo-PaperMod
A fast, clean, responsive Hugo theme.
pyo3_branchwater
Python plugin for fast search & gather
sourmash_plugin_commonhash
sourmash plugin to filter hashes/k-mers by presence across many sketches