Scientific Computing Facility @ MPI-CBG

gearshifft

Benchmark Suite for Heterogenuous FFT Implementations

tissue_miner

A toolkit to quantify cell dynamics in living tissues

CourseIntroToIA

Interactive-H-Watershed

preview watershed results on the fly as you update segmentation parameters

snakemake-workflows

snakemake workflows produced, tested and used at MPI CBG

halcyon

Halcyon is JavaFX framework for designing dockable multiple window applications

gtt

Gitlab Time Tracker App

ij2course-images

BioImageAnalysisToolbox

dlbc17-python-intro

ipf_howtoguides

Repo for webpage with How-To guides for image processing, created by the SCF from the MPI-CBG Dresden.

segmentation_3d_tools

gearshifft_results

Collection of Results produced by Gearshifft

mpicbg-scicomp.github.io

MPI-CBG Scientific Computing Facility

BioImageEssentialsToolbox

Generic image processing plugins for Fiji. To be distributed via SCF update site

gearshifft_publication

Publication Manuscript for results obtained with gearshifft

GlobeQuant_DDA

GlobeQuant_DIA

GQ

Another Global Quant

ij2course-regions

ij2course-scijava-plugin-mechanism

ij2course-tables

imagej-legacy

Backwards compatibility with ImageJ 1.x

imagej-table-charts

imagej-tutorials

ImageJ2 programming examples

Manual_drift_correction

phylo-io

Phylo.IO JS tree viewer

scijava-common

A plugin framework and application container with built-in extensibility mechanism.

scion

ThreeDViewer

ThreeDViewer is an ImageJ/FIJI plugin for visualization and interaction with 3D data