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morris-lab's repositories

This is the alpha version of the CellOracle package

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Capybara: A computational tool to measure cell identity and fate transitions

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This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.

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This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.

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Python package for the quantificatin of number of colonies

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Repository detailing updated allowlisting and clonal analysis workflow

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This repository contains our CellTag CloneHunter R package for clone-calling.

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Repository for scirpts to re-produce all major analyses in the CellTag-multi paper

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Relevant data and code for reproducing analysis of in vivo lineage tracing adipocyte precursors in skin

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Reproducibility Repository for Capybara

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Codes for celloracle web application

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Repository of the CellTag Viz Shiny App

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Imaging-based titration software for GFP-Celltag lentivirus

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